Computational Lab · interactive

Explore the science yourself.

Ten working tools, not screenshots. Six of them query public scientific APIs live from your browser, so you are looking at current data. Nothing you do here is uploaded, stored or tracked.

Educational tools. These are built for exploring methods and public data. Nothing here is clinical advice, a diagnostic result, or a basis for any decision about medicines.

01 · Pharmacogenomics explorer

Variant annotation from Ensembl, allele function and drug association from CPIC.

02 · Diplotype to phenotype

The CPIC assignment framework: activity scores and function categories, worked through for seven pharmacogenes.

Local computationThe method

03 · Variant to protein

Map a variant onto its residue, in the real translated sequence, and check the reference base agrees.

04 · VCF normalisation

Split multi-allelic records, trim shared bases, and left-align indels against the real reference.

05 · Read quality control

FASTQ parsing, Phred decoding and the diagnostics that decide whether a run is usable.

Local computationThe method

06 · Pharmacogene coverage audit

Choose what a panel assays, then see what it misses — and for whom.

07 · Population frequency explorer

Allele frequencies across gnomAD population groups, fetched live.

08 · Molecular explorer

Structures in 3D with descriptors and drug-likeness rules, from PubChem.

09 · Protein interaction network

Build a network around a protein, then watch the hubs move as you raise the confidence threshold.

10 · Statistics studio

Manhattan and QQ plots, and expression fold changes, computed in the page.

Local computationThe project